CLIJ2

Logo

GPU accelerated image processing for everyone

CLIJ2 home

pullLabelsToROIList

Pulls all labels in a label map as ROIs to a list.

From ImageJ macro this list is written to the log window. From ImageJ macro conside using pullLabelsToROIManager.

Usage in ImageJ macro

Ext.CLIJ2_pullLabelsToROIList(Image labelmap_input);

Usage in Java

clij2.pullLabelsToROIList(labelmap_input);
// init CLIJ and GPU
import net.haesleinhuepf.clij2.CLIJ2;
import net.haesleinhuepf.clij.clearcl.ClearCLBuffer;
CLIJ2 clij2 = CLIJ2.getInstance();

// get input parameters
ClearCLBuffer labelmap_input = clij2.push(labelmap_inputImagePlus);
// Execute operation on GPU
ArrayList resultPullLabelsToROIList = clij2.pullLabelsToROIList(labelmap_input);
//show result
System.out.println(resultPullLabelsToROIList);

// cleanup memory on GPU
clij2.release(labelmap_input);

Usage in Matlab

clij2.pullLabelsToROIList(labelmap_input);
% init CLIJ and GPU
clij2 = init_clatlab();

% get input parameters
labelmap_input = clij2.pushMat(labelmap_input_matrix);
% Execute operation on GPU
ArrayList resultPullLabelsToROIList = clij2.pullLabelsToROIList(labelmap_input);
% show result
System.out.println(resultPullLabelsToROIList);

% cleanup memory on GPU
clij2.release(labelmap_input);

Usage in Icy

clij2.pullLabelsToROIList(labelmap_input);
// init CLIJ and GPU
importClass(net.haesleinhuepf.clicy.CLICY);
importClass(Packages.icy.main.Icy);

clij2 = CLICY.getInstance();

// get input parameters
labelmap_input_sequence = getSequence();
labelmap_input = clij2.pushSequence(labelmap_input_sequence);
// Execute operation on GPU
ArrayList resultPullLabelsToROIList = clij2.pullLabelsToROIList(labelmap_input);
// show result
System.out.println(resultPullLabelsToROIList);

// cleanup memory on GPU
clij2.release(labelmap_input);

Back to CLIJ2 reference Back to CLIJ2 documentation

Imprint