CLIJ2

readIntensitiesFromMap

Takes a label image and an parametric image and reads parametric values from the labels positions.

The read intensity valus are stored in a new vector.

Note: This will only work if all labels have number of voxels == 1 or if all pixels in each label have the same value.

DEPRECATED: Use ReadValuesFromMap instead

Categories: Labels, Measurements, Graphs

Availability: Available in Fiji by activating the update sites clij and clij2. This function is part of clijx_-0.32.0.1.jar.

Usage in ImageJ macro

Ext.CLIJx_readIntensitiesFromMap(Image labels, Image map_image, Image values_destination);

Example notebooks

bead_segmentation.ipynb

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