translationTimelapseRegistration

Applies 2D translation registration to every pair of t, t+1 slices of a 2D+t image stack.

Availability: Available in Fiji by activating the update sites clij and clij2. This function is part of clijx_-0.32.0.1.jar.

Usage in ImageJ macro

Ext.CLIJx_translationTimelapseRegistration(Image input, Image output);

Usage in object oriented programming languages

Java

// init CLIJ and GPU
import net.haesleinhuepf.clijx.CLIJx;
import net.haesleinhuepf.clij.clearcl.ClearCLBuffer;
CLIJx clijx = CLIJx.getInstance();

// get input parameters
ClearCLBuffer input = clijx.push(inputImagePlus);
output = clijx.create(input);

// Execute operation on GPU
clijx.translationTimelapseRegistration(input, output);

// show result
outputImagePlus = clijx.pull(output);
outputImagePlus.show();

// cleanup memory on GPU
clijx.release(input);
clijx.release(output);

Matlab

% init CLIJ and GPU
clijx = init_clatlabx();

% get input parameters
input = clijx.pushMat(input_matrix);
output = clijx.create(input);

% Execute operation on GPU
clijx.translationTimelapseRegistration(input, output);

% show result
output = clijx.pullMat(output)

% cleanup memory on GPU
clijx.release(input);
clijx.release(output);

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