CLIJ2

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create3D

Allocated memory for a new 3D image in the GPU memory.

Parameters

destination : Image The new image will be stored in this variable. width : Number The width of the new image. height : Number The height of the new image. depth : Number The depth of the new image. bit-depth : Number The bit-depth of the new image. Can be either 8, 16 or 32, to create an image of unsigned-byte, unsigned-short or float type.

Availability: Available in Fiji by activating the update sites clij and clij2. This function is part of clij2_-2.5.0.1.jar.

create3D often follows after

create3D is often followed by

Usage in ImageJ macro

Ext.CLIJ2_create3D(Image destination, Number width, Number height, Number depth, Number bitDepth);

Example notebooks

benchmarking
image_segmentation_3d
tribolium_morphometry
crop_and_paste_images.ipynb
inspecting_3d_images.ipynb
multiply_matrices.ipynb
spots_pointlists_matrices_tables.ipynb
napari_dask.ipynb
mesh_between_centroids.ipynb
shape_descriptors_based_on_neighborhood_graphs.ipynb
Segmentation_3D.ipynb
voronoi_otsu_labeling.ipynb
affine_transforms.ipynb
tribolium_morphometry.ipynb
affine_transforms.ipynb
benchmarking.ipynb
benchmarking_centroids_of_labels.ipynb
benchmarking_some_operations.ipynb
connected_component_labeling.ipynb
convolution.ipynb
matrix_multiplication.ipynb
statistics_of_labeled_pixels.ipynb

Example scripts

addImages3D.ijm
allocateBigImages.ijm
benchmarking.ijm
division_visualisation.ijm
image_segmentation_3d.ijm
process_5D_stack.ijm
rotateFree.ijm
rotateOverwriteOriginal.ijm
rotating_sphere.ijm
scaleFree.ijm
translate.ijm
tribolium_morphometry.ijm
tubeness.ijm
tribolium.py

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