CLIJ2
GPU accelerated image processing for everyone
release
Frees memory of a specified image in GPU memory.
Availability: Available in Fiji by activating the update sites clij and clij2. This function is part of clij2_-2.5.0.1.jar.
release often follows after
- pushResultsTableColumn (2)
- connectedComponentsLabelingBox (12)
- greaterOrEqual (1)
- extendLabelingViaVoronoi (1)
- subtractImages (1)
- detectMaxima2DBox (2)
- thresholdDefault (3)
- thresholdOtsu (2)
- copySlice (1)
- voronoiLabeling (1)
- spotsToPointList (1)
- meanZProjection (1)
- binaryNot (5)
- replaceIntensities (2)
- minimum3DBox (5)
- excludeLabelsOnEdges (3)
- gaussianBlur3D (3)
- transposeXY (1)
- labelledSpotsToPointList (2)
- greaterConstant (3)
- detectLabelEdges (1)
- labelSpots (4)
- erodeBox (1)
- mask (1)
- countTouchingNeighbors (5)
- binaryAnd (6)
- maximum3DBox (2)
- create3D (2)
- topHatBox (3)
- meanOfTouchingNeighbors (1)
- maximum2DSphere (1)
- multiplyImageAndScalar (1)
- gaussianBlur2D (2)
- generateTouchCountMatrix (1)
- maximumZProjection (47)
- detectMaxima3DBox (1)
- generateTouchMatrix (4)
- touchMatrixToMesh (1)
- multiplyImages (5)
- generateDistanceMatrix (3)
- averageDistanceOfNClosestPoints (2)
Usage in ImageJ macro
Ext.CLIJ2_release(String image);
Example notebooks
basics
custom_clij_macro_functions
drosophila_max_cylinder_projection
superpixel_segmentation
tribolium_morphometry
Example scripts
basics.ijm
check_if_positions_are_in_roi.ijm
custom_clij_macro_functions.ijm
division_visualisation.ijm
drosophila_max_cylinder_projection.ijm
memory_reuse_versus_reallocation.ijm
oddEven.ijm
superpixel_segmentation.ijm
tribolium_morphometry.ijm
tubeness.ijm
simplePipeline.js